脊尾白虾(Exopalaemon carinicauda)维甲酸X受体基因克隆及其在温盐胁迫和蜕皮周期中的表达分析     

柳飞  李健  李吉涛  葛倩倩  连春盎  常志强 《海洋与湖沼》2016,47(4):828-837

为了明确脊尾白虾维甲酸X受体基因在环境胁迫和蜕皮周期中的作用,本研究通过RACE技术克隆了脊尾白虾(Exopalaemon carinicauda)维甲酸X受体c DNA全长,命名为Ec RXR基因,该c DNA序列全长为1323 bp,开放阅读框(ORF)为855 bp,编码一个284个氨基酸组成的蛋白质,分子量为30.918 k Da,理论等电点为PI为6.788;Ec RXR基因推导氨基酸序列经Blastp在线比对分析显示,Ec RXR与已知甲壳动物RXR的同源性为71%—90%;系统进化树分析结果显示,脊尾白虾Ec RXR的氨基酸序列与日本沼虾RXR的氨基酸序列聚为一支。荧光定量RT-PCR分析表明,Ec RXR基因在各组织中均有表达,而在眼柄相对表达量较高,血淋巴中最低。Ec RXR基因在蜕皮周期中的表达规律表明,Ec RXR基因表达在不同蜕皮时期存在明显变化,在眼柄、肝胰腺、胃和肠中整体呈现上升趋势,在鳃中呈现先下降后上升的趋势,在表皮中呈现逐渐降低的趋势。Ec RXR基因在温度、盐度胁迫过程中的表达规律分析结果发现,温度、盐度胁迫均可显著改变Ec RXR基因在鳃和肝胰腺中的表达模式,温度胁迫下Ec RXR基因在鳃中呈先上升后下降的表达趋势,肝胰腺中整体呈先上升后下降再上升再下降的表达趋势;盐度对鳃和肝胰腺的调控模式相同,均呈先升高后下降的变化趋势。本研究结果表明Ec RXR基因在脊尾白虾蜕皮发育、酶活性调控及渗透压调节中发挥重要作用,为深入研究甲壳动物维甲酸X受体基因的功能提供了重要的基础信息。  相似文献   

青蛤(Cyclina sinensis) TRAF6基因克隆及其在Poly I:C胁迫下的免疫应答     

高玮玮  潘宝平  闫春财 《海洋与湖沼》2016,47(5):1040-1046

对青蛤(Cyclina sinensis)转录组文库筛选并克隆得到青蛤TRAF6(Cs TRAF6)基因的c DNA序列,其开放阅读框为2337bp,编码778个氨基酸,分子量为86.59k Da。Cs TRAF6蛋白包含RING型锌指结构,两个TRAF型锌指结构,coiled-coil结构域以及MATH结构域。经生物信息学及分子系统学分析表明Cs TRAF6属于TRAF6家族的一员。利用实时荧光定量PCR方法检测了Cs TRAF6基因在青蛤各个组织以及在Poly I:C侵染下在血淋巴中的时序性表达情况。结果表明,Cs TRAF6基因在青蛤血淋巴、闭壳肌、鳃、性腺、外套膜和肝脏中普遍表达,其中在血淋巴中的表达水平最高。在Poly I:C刺激后的3h,青蛤血淋巴中Cs TRAF6的表达量迅速升高,在6h达到最大值,说明青蛤的Cs TRAF6基因参与了病毒类似物侵染下的免疫应答反应。  相似文献   

日本囊对虾Marsupenaeus japonicus)组织蛋白酶D基因克隆及表达分析     

张曼  程光平  苏永全  徐伊桦  冯文荣  王军  宋晓红  毛勇 《海洋学报》2016,38(8):52-61

组织蛋白酶D是溶酶体天冬氨酸蛋白酶家族的主要成员,广泛参与动物机体细胞内蛋白质的降解过程,对维持细胞稳态和正常代谢具有重要的作用。为研究组织蛋白酶D在甲壳动物非特异性免疫和幼体发育过程中的作用,本研究采用RACE技术首次克隆得到日本囊对虾组织蛋白酶D基因cDNA序列,命名为MjCatD,其中开放阅读框长为1161 bp,编码386个氨基酸残基。序列分析和同源建模显示该基因编码的蛋白含有保守的N-糖基化位点、天冬氨酸蛋白酶签名序列、酶活化位点和非消化性组织蛋白酶D的特征序列,并且呈保守的双叶形结构。同源性比较和系统进化分析发现,MjCatD与斑节对虾、美洲螯龙虾和脊尾白虾相似性较高,并且与它们紧密聚为一支。实时荧光定量PCR结果显示,MjCatD基因在日本囊对虾多个组织中均有表达,其中肝胰腺中表达量最高。在白斑综合征病毒(white spot syndrome virus, WSSV)感染后3～24 h日本囊对虾肝胰腺中MjCatD的表达量逐渐下降,而在48 h急剧上调至最高表达量并且与对照组差异极显著(P<0.01)。此外,MjCatD基因在幼体发育不同阶段中也表现出明显的变化趋势。以上研究表明,MjCatD基因可能参与日本囊对虾先天免疫反应和幼体发育过程。  相似文献   

藻华甲藻红色赤潮藻(Akashiwo sanguinea)实时荧光定量PCR内参基因的筛选     

邓蕴彦  胡章喜  马照鹏  唐赢中 《海洋学报(英文版)》2016,35(8):106-113

  相似文献   

基于相干特征的岩石薄片序列图像边缘提取及颗粒分割     

周恒  张春雷  张欣  陈庆轩  张艳  仲诚诚 《吉林大学学报(地球科学版)》2021,51(6):1897-1907

针对岩石颗粒边缘模糊、结构复杂的特点,为了更有效地识别颗粒边缘,在基于特征值的C3相干算法的基础上,融合多尺度和多角度的特征表达,提出了一种改进的C3相干算法。该算法综合考虑岩石薄片图像角度域光学特征、空间尺度信息和各向异性信息,能更有效地表征颗粒边缘特征,表现出对复杂矿物结构的适应能力。在采集的岩石薄片正交偏光图像上验证提出的算法,实验结果表明,与原生C3相干算法相比,改进后的C3相干算法在全局图像上的方差和灰度差分乘积分别提升了68.41%和22.91%,信息熵下降了21.61%。  相似文献   

Landslide susceptibility zonation method based on C5.0 decision tree and K-means cluster algorithms to improve the efficiency of risk management   总被引：1，自引：0，他引：1  

Zizheng Guo  Yu Shi  Faming Huang  Xuanmei Fan  Jinsong Huang 《地学前缘(英文版)》2021,12(6):243-261

Machine learning algorithms are an important measure with which to perform landslide susceptibility assessments,but most studies use GIS-based classification methods to conduct susceptibility zonation.This study presents a machine learning approach based on the C5.0 decision tree(DT)model and the K-means cluster algorithm to produce a regional landslide susceptibility map.Yanchang County,a typical landslide-prone area located in northwestern China,was taken as the area of interest to introduce the proposed application procedure.A landslide inventory containing 82 landslides was prepared and subse-quently randomly partitioned into two subsets:training data(70％landslide pixels)and validation data(30％landslide pixels).Fourteen landslide influencing factors were considered in the input dataset and were used to calculate the landslide occurrence probability based on the C5.0 decision tree model.Susceptibility zonation was implemented according to the cut-off values calculated by the K-means clus-ter algorithm.The validation results of the model performance analysis showed that the AUC(area under the receiver operating characteristic(ROC)curve)of the proposed model was the highest,reaching 0.88,compared with traditional models(support vector machine(SVM)=0.85,Bayesian network(BN)=0.81,frequency ratio(FR)=0.75,weight of evidence(WOE)=0.76).The landslide frequency ratio and fre-quency density of the high susceptibility zones were 6.76/km2 and 0.88/km2,respectively,which were much higher than those of the low susceptibility zones.The top 20％interval of landslide occurrence probability contained 89％of the historical landslides but only accounted for 10.3％of the total area.Our results indicate that the distribution of high susceptibility zones was more focused without contain-ing more"stable"pixels.Therefore,the obtained susceptibility map is suitable for application to landslide risk management practices.  相似文献   

Application of a Bayesian model to infer the contribution of coalbed natural gas produced water to the Powder River,Wyoming and Montana          下载免费PDF全文

Jason M. Mailloux  Kiona Ogle  Carol D. Frost 《水文研究》2014,28(4):2361-2381

The Powder River Basin (PRB) of Wyoming and Montana contains significant coal and coal bed natural gas (CBNG) resources. CBNG extraction requires the production of large volumes of water, much of which is discharged into existing drainages. Compared to surface waters, the CBNG produced water is high in sodium relative to calcium and magnesium, elevating the sodium adsorption ratio (SAR). To mitigate the possible impact this produced water may have on the quality of surface water used for irrigation, the State of Montana passed water anti‐degradation legislation, which could affect CBNG production in Wyoming. In this study, we sought to determine the proportion of CBNG produced water discharged to tributaries that reaches the Powder River by implementing a four end‐member mixing model within a Bayesian statistical framework. The model accounts for the ⁸⁷Sr/⁸⁶Sr, δ¹³C_DIC, [Sr] and [DIC] of CBNG produced water and surface water interacting with the three primary lithologies exposed in the PRB. The model estimates the relative contribution of the end members to the river water, while incorporating uncertainty associated with measurement and process error. Model results confirm that both of the tributaries associated with high CBNG activity are mostly composed of CBNG produced water (70–100%). The model indicates that up to 50% of the Powder River is composed of CBNG produced water downstream from the CBNG tributaries, decreasing with distance by dilution from non‐CBNG impacted tributaries from the point sources to ~10–20% at the Montana border. This amount of CBNG produced water does not significantly affect the SAR or electrical conductivity of the Powder River in Montana. Copyright © 2013 John Wiley & Sons, Ltd.  相似文献   

方差分量估计理论及其在边角网平差中的应用   总被引：1，自引：0，他引：1  

张万鹏 《武汉大学学报(信息科学版)》1988,(1)

本文从理论上阐明了MINQE(I,U)(最小范数二次不变无偏估计)方差分量估计出现负方差的原因;论述了存在MINQE(U,NND)估计量的充要条件;对边角网平羞问题而言,MINQE(I,U)估计法不可能同时准确地求出边长误差模型中的m_a~2和m_b~2。文章从边角网误差模型的特点出发,提出了一种新的方差分量估计模型(改进的方差分量估计模型),该模型能合理地确定方向和边长的方差分量,从而较好地解决了边角网平差中的定权问题。  相似文献   

地质统计学变差函数人机对话拟合     

肖克焱 《吉林大学学报(地球科学版)》1994,(2)

变差函数的研究在地质统计学中具有十分重要作用，本文运用界面图形图像处理强的Ｃ￣（＋＋）语言实现了界面友好汉化人机对话变差函数的拟合，主要包括管理菜单的生成，实验变差值的求解，变差图的图形显示，标准函数模型的计算及变差函数人机对话求解等部分。最后对比一下回归分析与人机对话拟合结果。  相似文献   

New Investigation on the Space Group of Chevkinite     

Yang Guangming Pan Zhaolu Wu Xiuling Liu Xiangwen China University of Geosciences  Wuhan 《中国地质大学学报(英文版)》1991,(1)

Chevkinite specimen from a rare-earth mineral deposit in Sichuan,southwest ofChina have been studied in detail by means of transmission electron microscope(TEM).The selected area electron diffraction(SAED)and convergent beam electron diffraction(CBED)patterns,obtained from different crystal zone axis direction,proved coineidently that the space group of chevkinite is C2/m.Fringe lattice image obser-vation showed the mineral crystal is structurally uniform in microscale,and it is anideal specimen for electron diffraction analysis.The mineral studied here is similar to theone from Bayan Obo,Inner Mongolia,China,in chemical composition and REE distri-bution.The chemical formula of the crystal is(Ce,La,…,Ca)_4 Fe~2-(Fe,Ti,Nb)_2O_8 (Si_2O_7)_2 .From our study,we come to the conclusion that the space group of the natu-ral chevkinite is C2/m,instead of P2_1/a as synthetic one.Up to now,chevkinitecompositionally similar to the synthetic one,in which the complete replacements of Ce,La by Nd and Fe by Mg or Co o  相似文献